The detailed information of tRNA gene sequence


Sequence ID>A171000178
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 522242
End posion on genome 522166
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaggtgact
tRNA gene sequence 
GGGCCGGTAGTCTAGCCTGGAAGGATGCCCGCTTGGCATGCGGGAGATCCCGGGTTCAAG
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
agtaatgatt
Secondary structure (Cloverleaf model)
>A171000178	Ala	GGC
                   t      ACCA agtaatgatt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G A A        G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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