The detailed information of tRNA gene sequence


Sequence ID>A171000183
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 83095
End posion on genome 83181
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgcgtgtat
tRNA gene sequence 
GCCGGGATCGCCTAGCCTGGGATGGCGCGGGCCTTGAGAGCCCGTGTCCGTATGGACACC
GGGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position 
aaatcctctc
Secondary structure (Cloverleaf model)
>A171000183	Ser	TGA
                   t      GCCA aaatcctctc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       C G G G G     C
    T         | | |                 T T
    G       T G G C
      G G A        G     TGTCCGTATGGACAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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