The detailed information of tRNA gene sequence


Sequence ID>A171000198
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 574470
End posion on genome 574546
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tactctgggc
tRNA gene sequence 
GGGCCCGTGGTCTAGATGGTTATGACGCCACCCTTACAAGGTGGAGGTCCGGGGTTCGAA
TCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
taagaaactt
Secondary structure (Cloverleaf model)
>A171000198	Val	TAC
                   c      ACCA taagaaactt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    T       T C T G       C G G G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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