The detailed information of tRNA gene sequence


Sequence ID>A171000202
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 1240162
End posion on genome 1240239
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttatgggcat
tRNA gene sequence 
GGGCCGGTGGCTTAGCCTGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCGCGGGTTCGA
ATCCCGCCCGGCCCGCCA
Downstream region at tRNA end position 
aaaacaaact
Secondary structure (Cloverleaf model)
>A171000202	Arg	CCG
                   t      GCCA aaaacaaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  T         T T C G       G C G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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