The detailed information of tRNA gene sequence


Sequence ID>A171000217
Genome IDCP000855
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus onnurineus NA1 [CP000855]
Start position on genome 1148116
End posion on genome 1148039
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttctctcaat
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGTCTAGGACACCGGCCTTCCAAGCCGGTGACCCGGGTTCAA
ATCCCGGCCACCGCACCA
Downstream region at tRNA end position 
cattctaaca
Secondary structure (Cloverleaf model)
>A171000217	Gly	TCC
                   t      ACCA cattctaaca
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     TGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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