The detailed information of tRNA gene sequence


Sequence ID>A171000230
Genome IDCP000866
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus maritimus SCM1 [CP000866]
Start position on genome 188725
End posion on genome 188797
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
agtagtttag
tRNA gene sequence 
GGGCCGGTGGTTTAGGGGTATAATGCCTCGTTCGCAACGAGGATGTCGAGGGTTCGATTC
CCTCCCGGTCCACtt
Downstream region at tRNA end position 
ttccagaaac
Secondary structure (Cloverleaf model)
>A171000230	Ala	CGC
                   g      ACtt ttccagaaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C T C C C     A
        G A        G      | | | | |     G
      G     T T T G       G A G G G     C
      G       | | +                 T T
      G     T A A T
        T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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