The detailed information of tRNA gene sequence


Sequence ID>A171000250
Genome IDCP000866
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus maritimus SCM1 [CP000866]
Start position on genome 418681
End posion on genome 418604
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttgattaa
tRNA gene sequence 
GCTCCCATAGTGTAGTCCGGTTAAGCATACAGCCCTCTCAAGGCTGTGACCCGGGTTCAA
ATCCCGGTGGGAGCACCA
Downstream region at tRNA end position 
ttctgtttaa
Secondary structure (Cloverleaf model)
>A171000250	Glu	CTC
                   a      ACCA ttctgtttaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        A     TGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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