The detailed information of tRNA gene sequence


Sequence ID>A171000255
Genome IDCP000867
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis [CP000867]
Start position on genome 324
End posion on genome 411
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acaagtgcga
tRNA gene sequence 
GCAGAGGTGGTTGAGCTTGGCCAAAGGCGCCGGACTTGAAATCCGGTTCTCCACTGGGGA
GCGGGGGTTCAAATCCCTCCCTCTGCGCtt
Downstream region at tRNA end position 
ctaattttac
Secondary structure (Cloverleaf model)
>A171000255	Ser	TGA
                   a      GCtt ctaattttac
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | + | | |     A
  T         G T T G       G G G G G     C
  G           + + |                 T T
  G         A G G C
    C C A A        G     TTCTCCACTGGGGAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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