The detailed information of tRNA gene sequence


Sequence ID>A171000301
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1436693
End posion on genome 1436770
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caaatcactt
tRNA gene sequence 
GCTCCGGTGGTGTAGCCCGGTCAAGCATAGGGGCCTTTCGAGCCCCAGACCCGGGTTCAA
ATCCCGGCCGGAGCACCA
Downstream region at tRNA end position 
gcgggggttg
Secondary structure (Cloverleaf model)
>A171000301	Glu	TTC
                   t      ACCA gcgggggttg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    T C A A        A     AGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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