The detailed information of tRNA gene sequence


Sequence ID>A171000318
Genome IDCP000968
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Korarchaeum cryptofilum OPF8 [CP000968]
Start position on genome 1340333
End posion on genome 1340262
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taattgaatc
tRNA gene sequence 
GCCGGGTTGGCCGAGCGGCATAGGCAGCGGGCTGCAGACCCGTGGACGGGGGTTCGAATC
CCCCACCCGGCTtca
Downstream region at tRNA end position 
ccctagccta
Secondary structure (Cloverleaf model)
>A171000318	Cys	GCA
                   c      Ttca ccctagccta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      A T          A     GGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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