The detailed information of tRNA gene sequence


Sequence ID>A171000330
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1146463
End posion on genome 1146540
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
atgtttcagg
tRNA gene sequence 
GGGCCCGTAGCTCAGTCAGGTCAGAGCGGCGGCCTTCGGAGCCGTAGGCCCCGGGTTCAA
ATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caatttttat
Secondary structure (Cloverleaf model)
>A171000330	Arg	TCG
                   g      GCCA caatttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     AGGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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