The detailed information of tRNA gene sequence


Sequence ID>A171000333
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1401056
End posion on genome 1401143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatggacgga
tRNA gene sequence 
GCCGGGGTGGCCGAGTTGGTCCAAGGCGCGGGCCTGCTAAGCCCGTCCCCGTTCGGGGGC
GTGGGTTCAAATCCCACCCCCGGCGCCA
Downstream region at tRNA end position 
ctatagaaac
Secondary structure (Cloverleaf model)
>A171000333	Ser	GCT
                   a      GCCA ctatagaaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C C A          G     TCCCCGTTCGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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