The detailed information of tRNA gene sequence


Sequence ID>A171000344
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 501343
End posion on genome 501417
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aataatgggT
tRNA gene sequence 
GGGCCGGTAGCTCAGCTGGAAGAGCGCCGCCCTCGCAAGGCGGAGGTCCCGGGTTCAAGT
CCCGGCCGGTCCATtt
Downstream region at tRNA end position 
aaaaagaaca
Secondary structure (Cloverleaf model)
>A171000344	Ala	CGC
                   T      ATtt aaaaagaaca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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