The detailed information of tRNA gene sequence


Sequence ID>A171000358
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 1319919
End posion on genome 1319844
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtaaaggat
tRNA gene sequence 
GCCGCCGTAGTATAGCCCGGCCTAGTATGCGGGCCTGTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCGGCGGCGCtc
Downstream region at tRNA end position 
gacacccatc
Secondary structure (Cloverleaf model)
>A171000358	Asp	GTC
                   t      GCtc gacacccatc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    C C T A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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