The detailed information of tRNA gene sequence


Sequence ID>A171000364
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 1030636
End posion on genome 1030560
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tttatcggct
tRNA gene sequence 
GGGCCCGTCGCCTAGCCAGGATAGGGCGCCGGCCTTCTAAGCCGGAGGCCCGGGGTTCGA
ATCCCCGCGGGCCCGCCt
Downstream region at tRNA end position 
ttcctttttc
Secondary structure (Cloverleaf model)
>A171000364	Arg	TCT
                   t      GCCt ttcctttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     G
  A         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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