The detailed information of tRNA gene sequence


Sequence ID>A171000385
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1188701
End posion on genome 1188775
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattacttaT
tRNA gene sequence 
GCCGGTGTGGCAGAACGGTTAATGCCTTCGTCTGCAAAGCGAATGTTCGGAGGTTCGACT
CCTCCTGCCGGCGTtt
Downstream region at tRNA end position 
tattctggga
Secondary structure (Cloverleaf model)
>A171000385	Cys	GCA
                   T      GTtt tattctggga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G + T          T C
                    T     C C T C C     A
      C A A        G      | | | | |     G
    G       G A C G       G G A G G     C
    G         | | |                 T T
    T       A T G C
      T A          C     TGTTC
                    T - A
                    T - A
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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