The detailed information of tRNA gene sequence


Sequence ID>A171000387
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1216077
End posion on genome 1216148
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttacacggct
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCCACGCGGCTGATTGCAGATCAGCTACACTCCGGTTCAATTC
CGGACCTTGGCTtcg
Downstream region at tRNA end position 
ggtaatagcg
Secondary structure (Cloverleaf model)
>A171000387	Cys	GCA
                   t      Ttcg ggtaatagcg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T T
                    T     A G G C C     A
        G A        G      | | | | |     A
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C C        G     TACAC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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