The detailed information of tRNA gene sequence


Sequence ID>A171000389
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2085731
End posion on genome 2085805
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagaacaggc
tRNA gene sequence 
GGGATAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTATCCCAtcg
Downstream region at tRNA end position 
agatcttctt
Secondary structure (Cloverleaf model)
>A171000389	Pro	TGG
                   c      Atcg agatcttctt
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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