The detailed information of tRNA gene sequence


Sequence ID>A171000397
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2830661
End posion on genome 2830747
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagtcggcgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGTAAGGCGGTGGCCTCGAAAGCCACTGGTGCTTGGCACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtt
Downstream region at tRNA end position 
gttctttgag
Secondary structure (Cloverleaf model)
>A171000397	Ser	CGA
                   T      GTtt gttctttgag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCTTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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