The detailed information of tRNA gene sequence


Sequence ID>A171000402
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2526954
End posion on genome 2526882
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgaacatga
tRNA gene sequence 
GGGGTCGTGGGGTAGCCTGGAATCCTATGGCGTTCGGGATGCTGTGACCTGAGTTCGAAT
CTCAGCGACCCCAttt
Downstream region at tRNA end position 
ctcataaatg
Secondary structure (Cloverleaf model)
>A171000402	Pro	CGG
                   a      Attt ctcataaatg
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    C       T G G G       C T G A G     C
    T         | | +                 T T
    G       T C C T
      G A A        A     TGAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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