The detailed information of tRNA gene sequence


Sequence ID>A171000404
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2224977
End posion on genome 2224893
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
attatcaggc
tRNA gene sequence 
GCGAGGGTTGCCGAGCCAGGTCAAAGGCGCTAGGTTCAGGGCCTAGTCACGCAGGTGTTC
GGGCGTTCGAATCGCCTCCCTCGCAttt
Downstream region at tRNA end position 
gttgtcttct
Secondary structure (Cloverleaf model)
>A171000404	Leu	CAG
                   c      Attt gttgtcttct
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T C C G C     A
    C C G A        T      + | | | |     G
  A         G C C G       G G G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCACGCAGGTGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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