The detailed information of tRNA gene sequence


Sequence ID>A171000407
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1965117
End posion on genome 1965044
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ggagacgccT
tRNA gene sequence 
GCCTCGGTAGGGTAGTGGATATCCTAGAAGCTTCCGGAGCTTTTGACCCGGGTTCGAGTC
CCGGCCGGGGCGTat
Downstream region at tRNA end position 
tgggattggg
Secondary structure (Cloverleaf model)
>A171000407	Arg	CCG
                   T      GTat tgggattggg
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          A     TGAC
                    G + T
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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