The detailed information of tRNA gene sequence


Sequence ID>A171000413
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1195658
End posion on genome 1195588
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctatgataat
tRNA gene sequence 
GCCAGAGTGGCGGAGTGGCTACGCGGCTGATTGCAGATCAGCGTATCCCGGTTCGATTCC
GGGCTCTGGCTtgg
Downstream region at tRNA end position 
ggtcttccca
Secondary structure (Cloverleaf model)
>A171000413	Cys	GCA
                   t      Ttgg ggtcttccca
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     GTAT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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