The detailed information of tRNA gene sequence


Sequence ID>A171000418
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 581922
End posion on genome 581848
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgcatagga
tRNA gene sequence 
AGCGAGGTAGGGTAGTCAGGAGATCCCGACGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATCCCTCGCTAtcg
Downstream region at tRNA end position 
attgttcata
Secondary structure (Cloverleaf model)
>A171000418	Met	CAT
                   a      Atcg attgttcata
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        A      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A G A          G     AGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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