The detailed information of tRNA gene sequence


Sequence ID>A171000420
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 356259
End posion on genome 356187
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctgcagaaaa
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGTCACGTTTGCAACGTGAAGGCCACGGGTTCAAATC
CCGTCGGGTCCACtg
Downstream region at tRNA end position 
ttttgcgatt
Secondary structure (Cloverleaf model)
>A171000420	Ala	TGC
                   a      ACtg ttttgcgatt
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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