The detailed information of tRNA gene sequence


Sequence ID>A171000421
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 265591
End posion on genome 265520
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaacaaccat
tRNA gene sequence 
GCCACGGTGGCGGAATGGCTACGCAGCTGACTGCAGATCAGCATATCCCGGTTCGATTCC
GGGCCATGGCTCtt
Downstream region at tRNA end position 
ttatgattcc
Secondary structure (Cloverleaf model)
>A171000421	Cys	GCA
                   t      TCtt ttatgattcc
                     G - C
                     C - G
                     C - G
                     A - T
                     C   A
                     G - C
                     G - C          T T
                    T     G G G C C     A
        A A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ATAT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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