The detailed information of tRNA gene sequence


Sequence ID>A171000425
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 25892
End posion on genome 25968
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccgataggc
tRNA gene sequence 
GCCAAGGTGGCAGAGTCTGGTCAGACGCAGCGGCCTGCAGAGCCGCCCAACGCCGGTTCA
AATCCGGCCCTTGGCTCtc
Downstream region at tRNA end position 
gtttcaactc
Secondary structure (Cloverleaf model)
>A171000425	Cys	GCA
                   c      TCtc gtttcaactc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  T         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    T C A G        A     CCAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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