The detailed information of tRNA gene sequence


Sequence ID>A171000433
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 756256
End posion on genome 756328
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tcgagcggtT
tRNA gene sequence 
GGATCGATAGCGCAACGGGAGCGCACCGCCCTGAAGAGGCGGAGGTCCCGGTTCGAGTCC
GGGTCGATCCATgt
Downstream region at tRNA end position 
cccgtggggc
Secondary structure (Cloverleaf model)
>A171000433	Phe	GAA
                   T      ATgt cccgtggggc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     A - T          T G
                    T     G G G C C     A
        A A        A      | | | | |     G
      C     C G C G       C C C G G     C
      G     | | | |                 T T
      G     G C G C
        G A        A     AGGT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.-

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