The detailed information of tRNA gene sequence


Sequence ID>A171000434
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 912731
End posion on genome 912803
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atgcgtacga
tRNA gene sequence 
GGGCTCGTAGATCAGTGGTAGATCATCCCCCTGGCACGGGGAAGGCCCGGGGTTCAAATC
CCCGCGAGTCCACta
Downstream region at tRNA end position 
ccgttttgcg
Secondary structure (Cloverleaf model)
>A171000434	Ala	GGC
                   a      ACta ccgttttgcg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      T     C T A G       C G G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        A     AGGCC
                    T - A
                    C - G
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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