The detailed information of tRNA gene sequence


Sequence ID>A171000441
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 1885479
End posion on genome 1885563
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgaatccgc
tRNA gene sequence 
GCGGGGGTGGCTGAGCCTGGCCAAAAGCGGCGGACTTAAGATCCGCTCCTGTAGAGGTTC
GAGGGTTCGAATCCCTTCCCCCGCAttc
Downstream region at tRNA end position 
ctgtcgcagt
Secondary structure (Cloverleaf model)
>A171000441	Leu	TAA
                   c      Attc ctgtcgcagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + | | | |     G
  T         G T C G       G A G G G     C
  G           | | |                 T T
  G         A A G C
    C C A A        G     TCCTGTAGAGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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