The detailed information of tRNA gene sequence


Sequence ID>A171000443
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 2220742
End posion on genome 2220816
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agagacgtgc
tRNA gene sequence 
GCTCTGGTGGTGTAGTCCGGCCAATCATATCACCCTCTCACGGTGATGACCTGGGTTCGA
ATCCCAGCCGGAGCAttt
Downstream region at tRNA end position 
ctgcgacgaa
Secondary structure (Cloverleaf model)
>A171000443	Glu	CTC
                   c      Attt ctgcgacgaa
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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