The detailed information of tRNA gene sequence


Sequence ID>A171000449
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 2648385
End posion on genome 2648310
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
attcgtgtcT
tRNA gene sequence 
GGGCCGGTAGCTCAGTTAGGGAGAGCGTCCGGCTTTTAACCGGACGGTCGGGGGTTCGAA
TCCCTCCCGGCCCGTgc
Downstream region at tRNA end position 
actgaaccgc
Secondary structure (Cloverleaf model)
>A171000449	Lys	TTT
                   T      GTgc actgaaccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G G A        G     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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