The detailed information of tRNA gene sequence


Sequence ID>A171000452
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 1828511
End posion on genome 1828441
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gatgcagaca
tRNA gene sequence 
GGGACCGTGGGGTAGTGGTATCCTATGCGGATGGGGTCCGTATGACCTGAGTTCGACTCT
CAGCGGTCCCAtac
Downstream region at tRNA end position 
gaattttacg
Secondary structure (Cloverleaf model)
>A171000452	Pro	GGG
                   a      Atac gaattttacg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T C
                    T     G A C T C     A
        G A        G      | | | | |     G
      T     T G G G       C T G A G     C
      G       | | +                 T T
      G     T C C T
        T A        A     TGAC
                    T - A
                    G + T
                    C - G
                    G - C
                    G - C
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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