The detailed information of tRNA gene sequence


Sequence ID>A171000466
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 359589
End posion on genome 359517
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gctgaatcga
tRNA gene sequence 
GCCGAAGTAGCTCAGCTGGTAGAGCGCCTCGCTGTTAACGAGGCGGTCCCAGGTTCGAGT
CCTGGCTTCGGCGtct
Downstream region at tRNA end position 
ctctgtttcc
Secondary structure (Cloverleaf model)
>A171000466	Asn	GTT
                   a      Gtct ctctgtttcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     G G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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