The detailed information of tRNA gene sequence


Sequence ID>A171000468
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 56762
End posion on genome 56692
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtatgggtac
tRNA gene sequence 
GGGACCGTGGGTTAGTGGTATACTCCGGGCCTTGGGTGCCCGAGACCCCGGTTCGAATCC
GGGCGGTCCCAtct
Downstream region at tRNA end position 
ttctgctgcg
Secondary structure (Cloverleaf model)
>A171000468	Pro	TGG
                   c      Atct ttctgctgcg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     T T G G       C C C G G     C
      G       | | +                 T T
      G     T A C T
        T A        C     AGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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