The detailed information of tRNA gene sequence


Sequence ID>A171000469
Genome IDCP001365
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
Start position on genome 56354
End posion on genome 56281
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgagtgcga
tRNA gene sequence 
GCCGCCTTAGCTCAGATTGGGAGAGCACTCGACTGAAGATCGAGCTGTCCCCCGTTCAAA
TCGGGGAGGCGGCAttt
Downstream region at tRNA end position 
tcctgcgaac
Secondary structure (Cloverleaf model)
>A171000469	Phe	GAA
                   a      Attt tcctgcgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G G C     A
      A G A        A      | | | | |     A
    T       C T C G       C C C C G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.-

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