The detailed information of tRNA gene sequence


Sequence ID>A171000476
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 619903
End posion on genome 619980
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccactcaaac
tRNA gene sequence 
GCCCGGGTGGTGTAGCCCGGCCTATCATACGGGACTGTCACTCCCGTGACCCGGGTTCAA
ATCCCGGCCCGGGCGCCA
Downstream region at tRNA end position 
aaactctttc
Secondary structure (Cloverleaf model)
>A171000476	Asp	GTC
                   c      GCCA aaactctttc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        A     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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