The detailed information of tRNA gene sequence


Sequence ID>A171000486
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 1769446
End posion on genome 1769521
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
attgggtcga
tRNA gene sequence 
GCCGCCGTAGCTTAGTTGGTAGAGCGCCGGACTGTTAATCCGGCGGTCCCCGGTTCGAAT
CCGGGCGGCGGCGCCA
Downstream region at tRNA end position 
tcagtgggcc
Secondary structure (Cloverleaf model)
>A171000486	Asn	GTT
                   a      GCCA tcagtgggcc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    T       T T C G       C C C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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