The detailed information of tRNA gene sequence


Sequence ID>A171000496
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 1877540
End posion on genome 1877464
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
acgggcctgt
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGCTAGGACAGCGGCCTGCCACGCCGCTGGCCCGGGTTCAAA
TCCCGGCCACCGCACCA
Downstream region at tRNA end position 
caaactttgg
Secondary structure (Cloverleaf model)
>A171000496	Gly	GCC
                   t      ACCA caaactttgg
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    C T A          A     TGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.-

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