The detailed information of tRNA gene sequence


Sequence ID>A171000503
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 1540711
End posion on genome 1540634
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tcgaggggtt
tRNA gene sequence 
GGGCCGGTGGCTTAGCCTGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCGCGGGTTCAA
ATCCCGCCCGGCCCGCCA
Downstream region at tRNA end position 
gaaaatttga
Secondary structure (Cloverleaf model)
>A171000503	Arg	CCG
                   t      GCCA gaaaatttga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     A
  T         T T C G       G C G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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