The detailed information of tRNA gene sequence


Sequence ID>A171000504
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 1077989
End posion on genome 1077913
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctcctccggt
tRNA gene sequence 
GCCGGGGTAGCCTAGCTCGGCAGGGCGGGGGACTCGTAATCCCCAGGTCCCGGGTTCAAA
TCCCGGTCCCGGCTCCA
Downstream region at tRNA end position 
ccacgttttt
Secondary structure (Cloverleaf model)
>A171000504	Thr	CGT
                   t      TCCA ccacgttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       T C C G       C C G G G     C
    C       + | | |                 T T
    G       G G G C
      G C A        G     AGGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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