The detailed information of tRNA gene sequence


Sequence ID>A171000511
Genome IDCP001398
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
Start position on genome 300242
End posion on genome 300165
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aagcgggtgt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGTACGAGCGCCGCCCTCGCAAGGCGGAGGCCGCGGGTTCAA
ATCCCGCCCGGTCCACCA
Downstream region at tRNA end position 
tagaaacctt
Secondary structure (Cloverleaf model)
>A171000511	Ala	CGC
                   t      ACCA tagaaacctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T A C          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK