The detailed information of tRNA gene sequence


Sequence ID>A171000724
Genome IDCP001687
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus utahensis DSM 12940 [CP001687]
Start position on genome 652935
End posion on genome 653017
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggctatcgt
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGCCCATTGCGCCGGTCTTGAAAACCGGTGGCGCAAGCCTCCTG
GGTTCAAATCCCAGCCCCACCGCtt
Downstream region at tRNA end position 
ctgcgcgaac
Secondary structure (Cloverleaf model)
>A171000724	Ser	TGA
                   t      GCtt ctgcgcgaac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C C A        G     TGGCGCAAGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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