The detailed information of tRNA gene sequence


Sequence ID>A171000793
Genome IDCP001688
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalomicrobium mukohataei DSM 12286 [CP001688]
Start position on genome 1505642
End posion on genome 1505569
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcactcgctc
tRNA gene sequence 
GGGCCGGTAGCTCAATCAGGTTGAGCGCTCGGCTGATAACCGGGAGGTTCGCGGTTCAAA
TCCGCGTCGGCCCAttc
Downstream region at tRNA end position 
gtttttcgca
Secondary structure (Cloverleaf model)
>A171000793	Ile	GAT
                   c      Attc gtttttcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     G C G C C     A
      T A A        A      | | | | |     A
    C       C T C G       C G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGTT
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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