The detailed information of tRNA gene sequence


Sequence ID>A171000804
Genome IDCP001688
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalomicrobium mukohataei DSM 12286 [CP001688]
Start position on genome 28241
End posion on genome 28156
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatgaagtga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCCGGCCAAGGCGGTTGCTTCGAGAGCAACTGTCCGTTCAGGACA
CGAGAGTTCAAATCTCTCCCTCGGCGttt
Downstream region at tRNA end position 
ctctgcgaac
Secondary structure (Cloverleaf model)
>A171000804	Ser	CGA
                   a      Gttt ctctgcgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C C G A        A      | | | | |     A
  C         T C C G       G A G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCGTTCAGGACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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