The detailed information of tRNA gene sequence


Sequence ID>A171000815
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 1281290
End posion on genome 1281374
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtctaactgc
tRNA gene sequence 
GCGAGGGTGGCCGAGTCTGGAAAAGGCGGCGGACTCAAGATCCGCTCTCGTAGGAGTCCG
TGGGTTCAAATCCCTCCCCTCGCACtt
Downstream region at tRNA end position 
gtgccgacga
Secondary structure (Cloverleaf model)
>A171000815	Leu	CAA
                   c      ACtt gtgccgacga
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      |   | | |     A
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    A A A          G     TCTCGTAGGAGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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