The detailed information of tRNA gene sequence


Sequence ID>A171000833
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 2567781
End posion on genome 2567709
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cacgccccga
tRNA gene sequence 
GCCGTCGTAGCTCAGTTGGTAGAGCACCTCGCTGTTAACGAGGTGGTCCCAGGTTCGAGT
CCTGGCGACGGCGtca
Downstream region at tRNA end position 
ctttttcagc
Secondary structure (Cloverleaf model)
>A171000833	Asn	GTT
                   a      Gtca ctttttcagc
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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