The detailed information of tRNA gene sequence


Sequence ID>A171000843
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 1159097
End posion on genome 1159012
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cggagtgcga
tRNA gene sequence 
GCAGGGATAGCCAAGTCTGGCCAACGGCGCAGCGTTCAGGGCGCTGTCCCATAGGGGTCC
GCAGGTTCAAATCCTGCTCCCTGCACtc
Downstream region at tRNA end position 
cgttttctca
Secondary structure (Cloverleaf model)
>A171000843	Leu	CAG
                   a      ACtc cgttttctca
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  T         A C C G       G C A G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCATAGGGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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