The detailed information of tRNA gene sequence


Sequence ID>A171000851
Genome IDCP001690
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum borinquense DSM 11551 PR 3 [CP001690]
Start position on genome 83043
End posion on genome 82969
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtgaaattga
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGACAGAGCGTCGGACTTCTAATCCGATGGTCGCGGGTTCGAA
TCCCGTCGCGCTCGCtc
Downstream region at tRNA end position 
ggccgacgac
Secondary structure (Cloverleaf model)
>A171000851	Arg	TCT
                   a      GCtc ggccgacgac
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        G     TGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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