The detailed information of tRNA gene sequence


Sequence ID>A171000859
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 811160
End posion on genome 811236
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
catttctcgt
tRNA gene sequence 
CCGGCGGTAGTTCAGCCTGGTAGAACGGCGGACTGTAGATCCGCATGTCGCTGGTTCAAA
TCCGGCCCGCCGGACCA
Downstream region at tRNA end position 
tcaacccctt
Secondary structure (Cloverleaf model)
>A171000859	Tyr	GTA
                   t      ACCA tcaacccctt
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | + | |     A
    C       C T T G       G C T G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        G     ATGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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